{"id":2125,"date":"2025-04-22T16:53:49","date_gmt":"2025-04-22T16:53:49","guid":{"rendered":"https:\/\/www.unioviedo.es\/electroanalysis\/?p=2125"},"modified":"2026-01-21T10:03:45","modified_gmt":"2026-01-21T10:03:45","slug":"refinement-and-truncation-of-dna-aptamers-based-on-moleculardynamics-simulations-computational-protocol-and-experimentalvalidation","status":"publish","type":"post","link":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/2025\/04\/22\/refinement-and-truncation-of-dna-aptamers-based-on-moleculardynamics-simulations-computational-protocol-and-experimentalvalidation\/","title":{"rendered":"Refinement and truncation of DNA aptamers based on molecular dynamics simulations: Computational protocol and experimental validation"},"content":{"rendered":"\n<p>A. D\u00edaz-Fern\u00e1ndez, C. S. Ciudad, N. D\u00edaz, D. Su\u00e1rez, N. de-los-Santos-A\u0301lvarez, M. J. Lobo-Castan\u0303\u00f3n<\/p>\n\n\n\n<p><em>J. Chem. Inf. Model. 65,  2025, 4128-4136<\/em><\/p>\n\n\n\n<p>doi: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.5c00243\" data-type=\"link\" data-id=\"https:\/\/doi.org\/10.1021\/acs.jcim.5c00243\">10.1021\/acs.jcim.5c00243<\/a>; <a href=\"https:\/\/ria.asturias.es\/RIA\/handle\/123456789\/14918\">https:\/\/ria.asturias.es\/RIA\/handle\/123456789\/14918<\/a> associated data: <a href=\"https:\/\/github.com\/dimassuarez\/APTAMD\" data-type=\"link\" data-id=\"https:\/\/github.com\/dimassuarez\/APTAMD\">https:\/\/github.com\/dimassuarez\/APTAMD<\/a>; <a href=\"https:\/\/github.com\/dimassuarez\/cencalc_quicksort.\">https:\/\/github.com\/dimassuarez\/cencalc_quicksort<\/a> ; <a href=\"https:\/\/doi.org\/10.5281\/zenodo.14809305\">https:\/\/doi.org\/10.5281\/zenodo.14809305<\/a>; <a href=\"https:\/\/hdl.handle.net\/10651\/80050\">https:\/\/hdl.handle.net\/10651\/80050<\/a><\/p>\n\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>A. D\u00edaz-Fern\u00e1ndez, C. S. Ciudad, N. D\u00edaz, D. Su\u00e1rez, N. de-los-Santos-A\u0301lvarez, M. J. Lobo-Castan\u0303\u00f3n J. Chem. Inf. Model. 65, 2025, 4128-4136 doi: 10.1021\/acs.jcim.5c00243; https:\/\/ria.asturias.es\/RIA\/handle\/123456789\/14918 associated data: https:\/\/github.com\/dimassuarez\/APTAMD; https:\/\/github.com\/dimassuarez\/cencalc_quicksort ; https:\/\/doi.org\/10.5281\/zenodo.14809305; https:\/\/hdl.handle.net\/10651\/80050<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[153],"tags":[50],"class_list":["post-2125","post","type-post","status-publish","format-standard","hentry","category-p2025","tag-a"],"_links":{"self":[{"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/posts\/2125","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/comments?post=2125"}],"version-history":[{"count":9,"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/posts\/2125\/revisions"}],"predecessor-version":[{"id":2477,"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/posts\/2125\/revisions\/2477"}],"wp:attachment":[{"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/media?parent=2125"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/categories?post=2125"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.unioviedo.es\/electroanalysis\/index.php\/wp-json\/wp\/v2\/tags?post=2125"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}